BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A05SP1|AL426133
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1544 0.0
>3x_Contig1682
Length = 16889
Score = 1544 bits (777), Expect = 0.0
Identities = 780/783 (99%)
Strand = Plus / Plus
Query: 1 tgtaatgtttctatatcttttaactttcctgggaaactatcttttctgatttcattagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8200 tgtaatgtttctatatcttttaactttcctgggaaactatcttttctgatttcattagtt 8259
Query: 61 aaatccttatctaagtgattcgcaggactccgaagcaaaaataagggaaatgttcgtggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8260 aaatccttatctaagtgattcgcaggactccgaagcaaaaataagggaaatgttcgtggt 8319
Query: 121 ttagacaaaggaaatgctagtcaatatgtgaaaagaaaagagaatttccgagtacacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8320 ttagacaaaggaaatgctagtcaatatgtgaaaagaaaagagaatttccgagtacacatt 8379
Query: 181 tacaagcactatcagccacctcttttaattctttgcagatatcgctaaaacgtctatcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8380 tacaagcactatcagccacctcttttaattctttgcagatatcgctaaaacgtctatcgg 8439
Query: 241 tcaactactcaaattgatttgatcaacataactttcgattttcaaaaataagcataatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8440 tcaactactcaaattgatttgatcaacataactttcgattttcaaaaataagcataatat 8499
Query: 301 ttcttcctttcctataggttttctccgtcacagtcaaaaaggtaacgttataactctgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8500 ttcttcctttcctataggttttctccgtcacagtcaaaaaggtaacgttataactctgac 8559
Query: 361 aagaatctgcaagctaattgcaatcaggaatttcgacatgagaaaccaaaaaaagaaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8560 aagaatctgcaagctaattgcaatcaggaatttcgacatgagaaaccaaaaaaagaaggt 8619
Query: 421 ggaactgtcggtttttgctatgcctcatcgcattgcagttcacctttagctccaagtgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8620 ggaactgtcggtttttgctatgcctcatcgcattgcagttcacctttagctccaagtgct 8679
Query: 481 aatgaatttcttcatttttcttttttttttagcgcctgtkatgcgtgtctcttgatccgt 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 8680 aatgaatttcttcatttttcttttttttttagcgcctgttatgcgtgtctcttgatccgt 8739
Query: 541 ctctaagcagtgagaaggatccaaccattgggtagtagtttgaataagtcagtcaggtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8740 ctctaagcagtgagaaggatccaaccattgggtagtagtttgaataagtcagtcaggtgt 8799
Query: 601 ttgataaacttctttactggtcaattttcaatacaaactagatcttagttaagcatttgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8800 ttgataaacttctttactggtcaattttcaatacaaactagatcttagttaagcatttgt 8859
Query: 661 raatraggcagctaagctgcttaaagtgaatgtttttctgatagttttcactgcatagtg 720
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8860 aaataaggcagctaagctgcttaaagtgaatgtttttctgatagttttcactgcatagtg 8919
Query: 721 cggggactcacaaagtgaaaacaaaaattaactactgggtagtaaactgacgtgtggttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8920 cggggactcacaaagtgaaaacaaaaattaactactgggtagtaaactgacgtgtggttg 8979
Query: 781 cag 783
|||
Sbjct: 8980 cag 8982
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8363
Number of Sequences: 1807
Number of extensions: 8363
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)